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GST e-invoicing threshold drops to ₹3 crore from June 2026: who is now in scope and what to fix this week

By Mansi Khurana & Siddharth Venkateshwaran · · GST

The Central Board of Indirect Taxes and Customs (CBIC) has notified the next phase of the GST e-invoicing roll-out: the aggregate turnover threshold drops from 5 crore to 3 crore with effect from 1 June 2026. Approximately 1.4 lakh additional taxpayers are estimated to come into scope this quarter, drawn predominantly from the manufacturing, wholesale trade, and B2B services segments.

The mechanics of e-invoicing have not changed since the 5 crore phase. An eligible taxpayer must report every B2B and B2G invoice (and export and SEZ supply) to one of the six Invoice Registration Portals (IRPs) before issuing the document to the buyer. The IRP returns an Invoice Reference Number (IRN) and a QR code, and only an invoice carrying these two markings is a valid tax invoice under Rule 48(4).

The four mistakes that get the buyer input tax credit denied are: issuing the invoice document before generating the IRN; generating the IRN but failing to print the QR code on the customer-facing PDF; reporting on a later date than the document date with more than a three-day lag; and using the wrong supply type field for inter-state versus intra-state.

KAMRIT can run a one-week eligibility recheck and IRP onboarding engagement for newly-covered taxpayers.

Author - Mansi Khurana, Associate Partner, Indirect Tax
Co-Author - Siddharth Venkateshwaran, Senior Associate, Tax Audit & Assurance

Mansi Khurana

Associate Partner, Indirect Tax

Mansi leads the GST and indirect tax practice at KAMRIT. She is a Chartered Accountant and Cost Accountant with 12 years of experience in GST registration, returns, refunds, ITC management, e-invoicing, and GST audit. She has recovered ₹14 crore in cumulative GST refunds for KAMRIT exporters.

mansi.khurana@kamrit.com

Siddharth Venkateshwaran

Senior Associate, Tax Audit & Assurance

Siddharth is a Senior Associate in the audit practice at KAMRIT. He is a Chartered Accountant with 8 years of experience in statutory audit, tax audit, internal audit, and ICFR reviews aligned with ICAI Standards on Auditing.

siddharth.v@kamrit.com

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